Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846918.1_cds_XP_016509828.1_22729
CDS Infomation

[gene=LOC107827242] [db_xref=GeneID:107827242] [protein=protein QUIRKY-like] [protein_id=XP_016509828.1] [location=25145..27451] [gbkey=CDS]
Sequence

ATGCAGAAAGGTCCAATACCAGAAGAGTTTGCTCTAAAGCAAACAGCTCCAAAAATAGTT
GGATCAGGGGTGATGATTGGAGGGGATAAGGTAACAGTTGCCTATGACCTCGTCGAGCAG
ATGGAATATCTATATGTTCGCGTTGTCAAGGCTAAAGAGTTGACAAAGGATGTCACAGGG
AGTTGTGATCCTTATGTTGAGGTAAAAGTAGGGAACTACAAGGGTGTCACAAAGCATTTC
GAGAAGAAAGCCAATCCCGAATGGAATTATGTGTTCGCCTTTTCTCAGGATCGACTTCAG
GCTTCTTACATTGAAGTTTGTCTGAAAGATAAGGATGTTCTGTTGGATGATTTGATCGGA
CGAGTCATCTTTGATCTCGTTGATGTACCGAGAAGAGTTCCACCGGATAGTTCATTAGCC
CCACAATGGTATAGATTGGAGGATAAAAGAGGTGAAAAGTTGAAAAAAGGGGAGATTATG
CTTGCTGTTTGGAAAGGAACTCAAGCGGACGAGGCGTTTAGTGATGCATGGCATTCAGAT
GCAGCAGCTGTAGGAAGTGAAGGAATTTCAAGAATTAGAGGGAAGGTATATTTATCTCCT
AGACTTTGGTATATTAGAGTTAATGTTATTGAATGCCAAGATTTGATCCCAAGTGAAAAG
AATCGCCAACCGGAATGTTGTGTGAAAGTTATATGTGGAAATCAGGCCTTGAAAACTAAA
ATTTCTCCAATAAAAAGTGTGAATCCAATGTGGAATGAGGATTTGGTTTTTGTAGTTGCT
GAACCATTTGAAGAGCCTTTAGTTATAAATGTTGAGGATAAAGTTGGATCAAATTTCGAG
TTTTTAGGAAAGTGTGTGCTTCCTTTTAGCACTGTTCCTAAAAGGCTTGACAATAAACCT
GTTGCTTCTAAATGGCACAATCTTGAGAAATATACAGTTGTAGAAGGGGAGAAAAAGGAG
ACAAAATTTGCTAGTAAGATTCATCTGAGGCTAAGTTTAGATGGTGGATATCACGTGTTG
GATGAATCGATACATTACAGCAGCGATTTCAAGCCAACGTCAAAGCTTTTGTGGAAATCC
AGCATTGGACTACTTGAATTGGGGATTATCAGTGCAACAGGATTGTCAGCTATGAAGTCC
AAGGATGGGCGAGGAACGACAGATGCCTATTGTGTAGCTAAGTACGGGCCAAAATGGGTT
CGTACAAGGACAATCATCGATAGTTTGTCACCAAAATGGAACGAGCAGTACACTTGGGAA
GTACACGATCCTTGTACCGTGATGACTGTAGGGGTGTTCGATAACGGATATCTACAAGGG
GGGAAATGTTCGAGCATTGGAAAGGTGAGGATTAGGCTCTCTACCCTTGAAACCGAAAAG
GTTTACACACATTCCTACCCTCTCATTGTCTTGCAACCCTCAGGTGTTAAAAAGATGGGA
GAAGTACAATTAGCTGTGAGGTTTTCGTGTACGTCTTATGTCAATATGCTTGCTAAATAT
GCTCAACCATTGTTTCCAAAGATGCATTATGCTCATCCCTTGTCTATTAGTCAGCAGGAT
TTTCTGAGGTTCCAAACTACTCAAATACTATCAACGAGGTTAGGCCGAGCAGAACCACCA
TTGAACAAAGAGGTTGTGGAGTATATGTTAGATGTTGGTTCGCATATATGGAGTGTCAGG
AGGGCTAAAGCTAATTTTTTCAGATTAATGTATGTTGTGAGTCCACTAATGGCTGTTGGA
AAATGGTTTGATCAAATATGTCATTGGAAAAATCCACTCACAACCATTCTGATTCACATA
CTCTTTGTAATATTAGTCCTATACCCTGAACTAATAGTTCCAACATTCTTTCTTTACCTT
TTCTTCATTGGTATTTGGCACTATAGATTAAAGCCAAGACATCCTCCTCACATGGACATC
CATCTTTCACATGCTCATGCTGTTTTCCCCGACGATTTGGATGAAGAATTCGATACGTTT
CCAACAACCAGAGGTTCGGATAAGGTGAGAATGAGATATGATCGTTTGAGAAGCGTTGGA
GGCAGGGTTCAGACCGTCATTGGAGACGTCGCGACTCAGGGTGAAAGGTTCCATTCCCTG
TTGAGCTGGAGAGATCCAAGGGCGTCGGCTTTATTTGTGGCATTCTGCTTATTTGCTGCA
ATAGCCATGTATGTCACACCATTCCAAGTCGTCGCACTTCTCACTGGATTCTATCTGTTG
AGACATCCGAGGTTTCGCCACAAACTACCTTCATTGTCTACTAATTTCTTCAAAAGGCTG
CCTGCAAGAGCAGACTGCATGTTGTAG

Peptide Sequence

PEP ID

XP_016509828.1
PEP Infomation

PREDICTED: protein QUIRKY-like [Nicotiana tabacum]
Sequence

MQKGPIPEEFALKQTAPKIVGSGVMIGGDKVTVAYDLVEQMEYLYVRVVKAKELTKDVTG
SCDPYVEVKVGNYKGVTKHFEKKANPEWNYVFAFSQDRLQASYIEVCLKDKDVLLDDLIG
RVIFDLVDVPRRVPPDSSLAPQWYRLEDKRGEKLKKGEIMLAVWKGTQADEAFSDAWHSD
AAAVGSEGISRIRGKVYLSPRLWYIRVNVIECQDLIPSEKNRQPECCVKVICGNQALKTK
ISPIKSVNPMWNEDLVFVVAEPFEEPLVINVEDKVGSNFEFLGKCVLPFSTVPKRLDNKP
VASKWHNLEKYTVVEGEKKETKFASKIHLRLSLDGGYHVLDESIHYSSDFKPTSKLLWKS
SIGLLELGIISATGLSAMKSKDGRGTTDAYCVAKYGPKWVRTRTIIDSLSPKWNEQYTWE
VHDPCTVMTVGVFDNGYLQGGKCSSIGKVRIRLSTLETEKVYTHSYPLIVLQPSGVKKMG
EVQLAVRFSCTSYVNMLAKYAQPLFPKMHYAHPLSISQQDFLRFQTTQILSTRLGRAEPP
LNKEVVEYMLDVGSHIWSVRRAKANFFRLMYVVSPLMAVGKWFDQICHWKNPLTTILIHI
LFVILVLYPELIVPTFFLYLFFIGIWHYRLKPRHPPHMDIHLSHAHAVFPDDLDEEFDTF
PTTRGSDKVRMRYDRLRSVGGRVQTVIGDVATQGERFHSLLSWRDPRASALFVAFCLFAA
IAMYVTPFQVVALLTGFYLLRHPRFRHKLPSLSTNFFKRLPARADCML

Transcript Sequence

Gene sequence data has not been registered.